Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX5Q8N196 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SIX5Q8N196 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX5Q8N196 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.24■□□□□ 0.03
SIX5Q8N196 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SIX5Q8N196 AC005632.3-201ENST00000605544 308 ntBASIC15.24■□□□□ 0.03
SIX5Q8N196 MIR6769A-201ENST00000617340 73 ntBASIC15.24■□□□□ 0.03
SIX5Q8N196 AP002414.2-201ENST00000591780 3365 ntBASIC15.24■□□□□ 0.03
SIX5Q8N196 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SIX5Q8N196 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.24■□□□□ 0.03
SIX5Q8N196 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.24■□□□□ 0.03
SIX5Q8N196 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SIX5Q8N196 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SIX5Q8N196 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 AC127383.1-201ENST00000444697 1800 ntBASIC15.23■□□□□ 0.03
SIX5Q8N196 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.23■□□□□ 0.03
SIX5Q8N196 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 AC018463.1-201ENST00000456674 917 ntBASIC15.23■□□□□ 0.03
SIX5Q8N196 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.23■□□□□ 0.03
SIX5Q8N196 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.23■□□□□ 0.03
SIX5Q8N196 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SIX5Q8N196 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SIX5Q8N196 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.23■□□□□ 0.03
SIX5Q8N196 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.23■□□□□ 0.03
SIX5Q8N196 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SIX5Q8N196 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 FRMPD2B-201ENST00000431305 1347 ntBASIC15.22■□□□□ 0.03
SIX5Q8N196 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SIX5Q8N196 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.22■□□□□ 0.03
SIX5Q8N196 Z69890.1-201ENST00000382990 339 ntBASIC15.22■□□□□ 0.03
SIX5Q8N196 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SIX5Q8N196 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SIX5Q8N196 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms