Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 AC120057.1-201ENST00000483947 663 ntBASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 SPDYE18-201ENST00000510091 1050 ntBASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 AL512361.1-201ENST00000554200 418 ntBASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXR1Q6PIV2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
FOXR1Q6PIV2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AL391825.1-201ENST00000457671 1364 ntBASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AC016397.2-201ENST00000624848 1985 ntBASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 BTBD7P1-201ENST00000447253 1453 ntBASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXR1Q6PIV2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms