Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 FAM58DP-201ENST00000428076 619 ntBASIC11.89□□□□□ -0.51
FAM78BQ5VT40 RBPMS2P1-201ENST00000437762 623 ntBASIC11.89□□□□□ -0.51
FAM78BQ5VT40 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
FAM78BQ5VT40 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 AC022447.6-201ENST00000515522 438 ntBASIC11.88□□□□□ -0.51
FAM78BQ5VT40 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 AC093520.2-201ENST00000561830 333 ntBASIC11.88□□□□□ -0.51
FAM78BQ5VT40 AC003101.2-201ENST00000612557 442 ntBASIC11.88□□□□□ -0.51
FAM78BQ5VT40 AC018529.1-201ENST00000613063 361 ntBASIC11.88□□□□□ -0.51
FAM78BQ5VT40 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
FAM78BQ5VT40 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.87□□□□□ -0.51
FAM78BQ5VT40 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms