Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ATPAF1Q5TC12 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 GAPDHP40-201ENST00000505218 1006 ntBASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 MIR3197-201ENST00000582241 73 ntBASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 TMEM261P1-201ENST00000604899 340 ntBASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 AC025181.2-201ENST00000606994 802 ntBASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ATPAF1Q5TC12 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 TCAF1P1-201ENST00000414990 2232 ntBASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms