Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 DNAJB3-201ENST00000446806 729 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PPP6R2P1-201ENST00000450880 1275 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 MIR6074-201ENST00000612054 107 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AL138828.2-201ENST00000615812 383 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SPDYE12P-201ENST00000618416 771 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AC073548.1-201ENST00000624088 1882 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 COL6A4P2-202ENST00000504443 2753 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AC215219.1-201ENST00000400706 1817 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AC027612.1-201ENST00000445234 2395 ntBASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PEG13-201ENST00000631594 5667 ntBASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AC069262.1-201ENST00000539058 672 ntBASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 AL158212.4-201ENST00000624062 1286 ntBASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
LINC00242Q5T6M2 FAM90A12P-201ENST00000519497 2375 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms