Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 MYADML-201ENST00000474610 2147 ntBASIC14.32□□□□□ -0.12
RFTN2Q52LD8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.32□□□□□ -0.12
RFTN2Q52LD8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 LRRC59-203ENST00000576448 1531 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 TLE1P1-201ENST00000422965 589 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 DFFBP1-201ENST00000433250 979 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 INGX-202ENST00000489074 768 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AC092364.2-202ENST00000597012 1073 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 CHCHD2P3-201ENST00000603038 451 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AC133539.2-201ENST00000604757 467 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 TMEM261P1-201ENST00000604899 340 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AC006538.3-201ENST00000612495 578 ntBASIC14.31□□□□□ -0.12
RFTN2Q52LD8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RFTN2Q52LD8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 CICP16-201ENST00000502609 2813 ntBASIC14.3□□□□□ -0.12
RFTN2Q52LD8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 ST20-AS1-201ENST00000560255 4223 ntBASIC14.3□□□□□ -0.12
RFTN2Q52LD8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 ACTBP8-201ENST00000403258 1108 ntBASIC14.3□□□□□ -0.12
RFTN2Q52LD8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RFTN2Q52LD8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms