Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AC099336.1-201ENST00000417053 1171 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 CSF2RBP1-201ENST00000447905 391 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 TDH-203ENST00000531764 1110 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AC036164.1-201ENST00000570544 333 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AC243960.2-201ENST00000600996 747 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AC097359.3-201ENST00000603982 1210 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 CU634019.7-201ENST00000624153 1185 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 FP236241.2-201ENST00000624906 1185 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CHRFAM7AQ494W8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AC084364.1-201ENST00000551967 1556 ntBASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AL607033.1-201ENST00000623900 1599 ntBASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHRFAM7AQ494W8 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CHRFAM7AQ494W8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRFAM7AQ494W8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.1□□□□□ -0.31
CHRFAM7AQ494W8 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRFAM7AQ494W8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRFAM7AQ494W8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CHRFAM7AQ494W8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHRFAM7AQ494W8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms