Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.56□□□□□ -0.72
RPL39P62891 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RPL39P62891 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 AC020910.6-201ENST00000623084 1459 ntBASIC10.55□□□□□ -0.72
RPL39P62891 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 AL035456.1-201ENST00000456064 1369 ntBASIC10.55□□□□□ -0.72
RPL39P62891 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 TCAM1P-207ENST00000485295 1537 ntBASIC10.55□□□□□ -0.72
RPL39P62891 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 AL450487.1-201ENST00000426799 995 ntBASIC10.55□□□□□ -0.72
RPL39P62891 AC004066.1-201ENST00000502488 802 ntBASIC10.55□□□□□ -0.72
RPL39P62891 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.55□□□□□ -0.72
RPL39P62891 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC10.55□□□□□ -0.72
RPL39P62891 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.55□□□□□ -0.72
RPL39P62891 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.55□□□□□ -0.72
RPL39P62891 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.55□□□□□ -0.72
RPL39P62891 AC007967.4-201ENST00000614700 386 ntBASIC10.55□□□□□ -0.72
RPL39P62891 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.55□□□□□ -0.72
RPL39P62891 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.55□□□□□ -0.72
RPL39P62891 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
RPL39P62891 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
RPL39P62891 PCDHA5-203ENST00000614258 4248 ntBASIC10.54□□□□□ -0.72
RPL39P62891 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
RPL39P62891 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.54□□□□□ -0.72
RPL39P62891 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
RPL39P62891 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.54□□□□□ -0.72
RPL39P62891 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
RPL39P62891 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms