Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
AP3S2P59780 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.8□□□□□ -0.36
AP3S2P59780 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AP3S2P59780 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S2P59780 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S2P59780 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 AC215219.1-201ENST00000400706 1817 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S2P59780 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
AP3S2P59780 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
AP3S2P59780 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S2P59780 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 KRT18P43-201ENST00000469825 1281 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 RN7SL589P-201ENST00000481268 310 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 FAM86C2P-203ENST00000528684 1004 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 AL135744.1-201ENST00000565098 629 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 AC106730.1-201ENST00000566722 1090 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 AC099522.2-201ENST00000607001 744 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S2P59780 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S2P59780 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S2P59780 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
AP3S2P59780 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S2P59780 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 CES1P1-201ENST00000421606 1704 ntBASIC12.79□□□□□ -0.36
AP3S2P59780 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S2P59780 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.79□□□□□ -0.36
AP3S2P59780 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 AC019294.4-201ENST00000561777 2905 ntBASIC12.78□□□□□ -0.36
AP3S2P59780 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.78□□□□□ -0.36
AP3S2P59780 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 CICP16-201ENST00000502609 2813 ntBASIC12.78□□□□□ -0.36
AP3S2P59780 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP3S2P59780 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
AP3S2P59780 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.78□□□□□ -0.36
AP3S2P59780 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms