Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
GFRA1P56159 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
GFRA1P56159 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 AC009093.10-201ENST00000641956 1442 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.24□□□□□ -0.29
GFRA1P56159 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
GFRA1P56159 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 MBLAC2-202ENST00000514906 1936 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.24□□□□□ -0.29
GFRA1P56159 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GFRA1P56159 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.24□□□□□ -0.29
GFRA1P56159 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 AC016700.1-201ENST00000429424 312 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.24□□□□□ -0.29
GFRA1P56159 CALR4P-201ENST00000431943 946 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.24□□□□□ -0.29
GFRA1P56159 HLA-J-204ENST00000495278 958 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.24□□□□□ -0.29
GFRA1P56159 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.24□□□□□ -0.29
GFRA1P56159 AL160314.3-201ENST00000556041 767 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 AC005962.1-201ENST00000584100 773 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 AC090164.2-201ENST00000611487 516 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.24□□□□□ -0.29
GFRA1P56159 AL139099.5-201ENST00000635274 300 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.24□□□□□ -0.29
GFRA1P56159 MTHFR-210ENST00000641407 2387 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.24□□□□□ -0.29
GFRA1P56159 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 DBET-201ENST00000630918 3363 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 TNRC18P2-201ENST00000417666 2714 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.24□□□□□ -0.29
GFRA1P56159 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GFRA1P56159 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
GFRA1P56159 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
GFRA1P56159 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GFRA1P56159 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 AL133338.1-201ENST00000565695 1517 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 AL354702.1-201ENST00000442006 1960 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 AC006504.5-208ENST00000588784 2401 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GFRA1P56159 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GFRA1P56159 FNTAP2-201ENST00000430308 634 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 EIF4HP1-201ENST00000453115 687 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms