Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHB4P54760 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.73■□□□□ 0.27
EPHB4P54760 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.73■□□□□ 0.27
EPHB4P54760 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHB4P54760 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHB4P54760 LRRC59-203ENST00000576448 1531 ntBASIC16.73■□□□□ 0.27
EPHB4P54760 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EPHB4P54760 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EPHB4P54760 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 KRT8P29-201ENST00000420409 1371 ntBASIC16.73■□□□□ 0.27
EPHB4P54760 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.73■□□□□ 0.27
EPHB4P54760 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHB4P54760 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHB4P54760 AC139749.1-202ENST00000617529 3139 ntBASIC16.72■□□□□ 0.27
EPHB4P54760 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EPHB4P54760 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHB4P54760 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.72■□□□□ 0.27
EPHB4P54760 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.72■□□□□ 0.27
EPHB4P54760 AC021723.1-201ENST00000486306 515 ntBASIC16.72■□□□□ 0.27
EPHB4P54760 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.72■□□□□ 0.27
EPHB4P54760 NPM1P43-201ENST00000558669 786 ntBASIC16.72■□□□□ 0.27
EPHB4P54760 AC013355.1-201ENST00000562625 723 ntBASIC16.72■□□□□ 0.27
EPHB4P54760 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.72■□□□□ 0.27
EPHB4P54760 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 ZACNP1-201ENST00000612259 710 ntBASIC16.72■□□□□ 0.27
EPHB4P54760 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
EPHB4P54760 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHB4P54760 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
EPHB4P54760 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHB4P54760 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
EPHB4P54760 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHB4P54760 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
EPHB4P54760 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHB4P54760 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.71■□□□□ 0.27
EPHB4P54760 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 POM121L8P-201ENST00000417732 1281 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 POM121L9P-203ENST00000441984 1285 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.71■□□□□ 0.27
EPHB4P54760 RN7SL818P-201ENST00000485099 259 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.71■□□□□ 0.27
EPHB4P54760 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 AC103988.2-201ENST00000561804 725 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 RN7SL725P-201ENST00000606439 259 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 AL353770.1-201ENST00000614915 403 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.71■□□□□ 0.27
EPHB4P54760 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
EPHB4P54760 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms