Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNB3P54284 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNB3P54284 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CACNB3P54284 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNB3P54284 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNB3P54284 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNB3P54284 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CACNB3P54284 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNB3P54284 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CACNB3P54284 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNB3P54284 MIR557-201ENST00000385239 98 ntBASIC17.41■□□□□ 0.38
CACNB3P54284 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNB3P54284 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNB3P54284 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNB3P54284 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNB3P54284 RPSAP15-201ENST00000448168 861 ntBASIC17.41■□□□□ 0.38
CACNB3P54284 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.41■□□□□ 0.38
CACNB3P54284 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.41■□□□□ 0.38
CACNB3P54284 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 MIR3188-201ENST00000583494 85 ntBASIC17.41■□□□□ 0.38
CACNB3P54284 RPL17P45-201ENST00000586289 509 ntBASIC17.41■□□□□ 0.38
CACNB3P54284 SIGLEC18P-201ENST00000602271 909 ntBASIC17.41■□□□□ 0.38
CACNB3P54284 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CACNB3P54284 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CACNB3P54284 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNB3P54284 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CACNB3P54284 AL109954.1-202ENST00000564051 2148 ntBASIC17.41■□□□□ 0.38
CACNB3P54284 AC105917.1-201ENST00000506637 2539 ntBASIC17.41■□□□□ 0.38
CACNB3P54284 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNB3P54284 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNB3P54284 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CACNB3P54284 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNB3P54284 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CACNB3P54284 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNB3P54284 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNB3P54284 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNB3P54284 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNB3P54284 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CACNB3P54284 AL807761.2-201ENST00000422849 729 ntBASIC17.4■□□□□ 0.38
CACNB3P54284 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNB3P54284 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNB3P54284 PGAM1P5-201ENST00000548011 764 ntBASIC17.4■□□□□ 0.38
CACNB3P54284 AC007326.1-201ENST00000604539 458 ntBASIC17.4■□□□□ 0.38
CACNB3P54284 AC005632.3-201ENST00000605544 308 ntBASIC17.4■□□□□ 0.38
CACNB3P54284 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CACNB3P54284 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
CACNB3P54284 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CACNB3P54284 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNB3P54284 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNB3P54284 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNB3P54284 AC013268.4-201ENST00000637413 2228 ntBASIC17.4■□□□□ 0.38
CACNB3P54284 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNB3P54284 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.39■□□□□ 0.38
CACNB3P54284 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CACNB3P54284 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.39■□□□□ 0.38
CACNB3P54284 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CACNB3P54284 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNB3P54284 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CACNB3P54284 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNB3P54284 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNB3P54284 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.39■□□□□ 0.37
CACNB3P54284 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNB3P54284 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CACNB3P54284 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms