Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
LIMK1P53667 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 E2F3P2-201ENST00000447755 1422 ntBASIC14.61□□□□□ -0.07
LIMK1P53667 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.61□□□□□ -0.07
LIMK1P53667 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 AP003398.1-201ENST00000531124 318 ntBASIC14.61□□□□□ -0.07
LIMK1P53667 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.61□□□□□ -0.07
LIMK1P53667 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.61□□□□□ -0.07
LIMK1P53667 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.61□□□□□ -0.07
LIMK1P53667 AL109837.1-201ENST00000603272 613 ntBASIC14.61□□□□□ -0.07
LIMK1P53667 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 MIR6769A-201ENST00000617340 73 ntBASIC14.61□□□□□ -0.07
LIMK1P53667 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 AC104581.4-201ENST00000623126 3052 ntBASIC14.61□□□□□ -0.07
LIMK1P53667 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LIMK1P53667 AL008718.2-201ENST00000609206 1313 ntBASIC14.61□□□□□ -0.07
LIMK1P53667 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LIMK1P53667 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LIMK1P53667 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LIMK1P53667 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
LIMK1P53667 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
LIMK1P53667 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LIMK1P53667 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.6□□□□□ -0.07
LIMK1P53667 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LIMK1P53667 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK1P53667 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LIMK1P53667 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK1P53667 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LIMK1P53667 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK1P53667 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.6□□□□□ -0.07
LIMK1P53667 AC012158.2-201ENST00000536546 354 ntBASIC14.6□□□□□ -0.07
LIMK1P53667 DNM1P51-201ENST00000558149 522 ntBASIC14.6□□□□□ -0.07
LIMK1P53667 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.6□□□□□ -0.07
LIMK1P53667 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIMK1P53667 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
LIMK1P53667 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LIMK1P53667 TSPY26P-202ENST00000565928 3884 ntBASIC14.6□□□□□ -0.07
LIMK1P53667 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LIMK1P53667 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.6□□□□□ -0.07
LIMK1P53667 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LIMK1P53667 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LIMK1P53667 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.59□□□□□ -0.07
LIMK1P53667 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 LINC00552-201ENST00000625151 2579 ntBASIC14.59□□□□□ -0.07
LIMK1P53667 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.59□□□□□ -0.07
LIMK1P53667 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIMK1P53667 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
LIMK1P53667 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
LIMK1P53667 AC005912.2-201ENST00000619492 2400 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms