Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 SALL4P5-201ENST00000419001 1760 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
HCFC1P51610 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
HCFC1P51610 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 FAM45BP-202ENST00000592932 1624 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.83□□□□□ -0.36
HCFC1P51610 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 LILRP1-201ENST00000444199 1370 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 AC013726.1-201ENST00000563747 2285 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.83□□□□□ -0.36
HCFC1P51610 ST13P19-201ENST00000442505 1124 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 PUDPP3-201ENST00000445368 636 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 CICP12-201ENST00000455801 843 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.83□□□□□ -0.36
HCFC1P51610 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.83□□□□□ -0.36
HCFC1P51610 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC12.83□□□□□ -0.36
HCFC1P51610 MIR6720-201ENST00000611664 98 ntBASIC12.83□□□□□ -0.36
HCFC1P51610 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
HCFC1P51610 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.83□□□□□ -0.36
HCFC1P51610 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HCFC1P51610 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.82□□□□□ -0.36
HCFC1P51610 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.82□□□□□ -0.36
HCFC1P51610 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.82□□□□□ -0.36
HCFC1P51610 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HCFC1P51610 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 AC239868.1-201ENST00000369385 493 ntBASIC12.82□□□□□ -0.36
HCFC1P51610 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.82□□□□□ -0.36
HCFC1P51610 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.82□□□□□ -0.36
HCFC1P51610 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.82□□□□□ -0.36
HCFC1P51610 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.82□□□□□ -0.36
HCFC1P51610 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 AL031713.1-201ENST00000564813 661 ntBASIC12.82□□□□□ -0.36
HCFC1P51610 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.82□□□□□ -0.36
HCFC1P51610 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.82□□□□□ -0.36
HCFC1P51610 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HCFC1P51610 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.82□□□□□ -0.36
HCFC1P51610 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HCFC1P51610 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.81□□□□□ -0.36
HCFC1P51610 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms