Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBP50607 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBP50607 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
TUBP50607 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TUBP50607 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 AC020907.1-201ENST00000616460 1350 ntBASIC15.68■□□□□ 0.1
TUBP50607 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBP50607 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 CHMP1AP1-201ENST00000445563 662 ntBASIC15.68■□□□□ 0.1
TUBP50607 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBP50607 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TUBP50607 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBP50607 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBP50607 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.68■□□□□ 0.1
TUBP50607 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBP50607 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.68■□□□□ 0.1
TUBP50607 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 FKBP4P6-201ENST00000457486 1332 ntBASIC15.68■□□□□ 0.1
TUBP50607 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBP50607 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBP50607 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TUBP50607 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBP50607 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 AL122018.1-201ENST00000446607 2310 ntBASIC15.67■□□□□ 0.1
TUBP50607 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBP50607 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBP50607 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBP50607 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
TUBP50607 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 RN7SKP175-201ENST00000408472 289 ntBASIC15.67■□□□□ 0.1
TUBP50607 AC004945.1-201ENST00000416738 983 ntBASIC15.67■□□□□ 0.1
TUBP50607 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBP50607 TLE1P1-201ENST00000422965 589 ntBASIC15.67■□□□□ 0.1
TUBP50607 AC007969.1-201ENST00000433675 447 ntBASIC15.67■□□□□ 0.1
TUBP50607 HSPB1P2-201ENST00000448722 546 ntBASIC15.67■□□□□ 0.1
TUBP50607 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBP50607 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBP50607 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 FAM8A2P-201ENST00000528813 1142 ntBASIC15.67■□□□□ 0.1
TUBP50607 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBP50607 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
TUBP50607 AC005695.3-201ENST00000614522 232 ntBASIC15.67■□□□□ 0.1
TUBP50607 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
TUBP50607 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBP50607 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBP50607 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBP50607 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms