Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CDC34P49427 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CDC34P49427 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CDC34P49427 SPDYE17-201ENST00000412399 783 ntBASIC11.81□□□□□ -0.52
CDC34P49427 SPCS2P4-201ENST00000436160 681 ntBASIC11.81□□□□□ -0.52
CDC34P49427 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 KRT18P43-201ENST00000469825 1281 ntBASIC11.81□□□□□ -0.52
CDC34P49427 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.81□□□□□ -0.52
CDC34P49427 UNC93B7-201ENST00000509439 705 ntBASIC11.81□□□□□ -0.52
CDC34P49427 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.81□□□□□ -0.52
CDC34P49427 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.81□□□□□ -0.52
CDC34P49427 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.81□□□□□ -0.52
CDC34P49427 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.81□□□□□ -0.52
CDC34P49427 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 AC105021.1-202ENST00000570572 669 ntBASIC11.81□□□□□ -0.52
CDC34P49427 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.81□□□□□ -0.52
CDC34P49427 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 NUTM2HP-201ENST00000442076 2498 ntBASIC11.81□□□□□ -0.52
CDC34P49427 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 AL360270.3-201ENST00000609118 1348 ntBASIC11.81□□□□□ -0.52
CDC34P49427 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CDC34P49427 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.81□□□□□ -0.52
CDC34P49427 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.81□□□□□ -0.52
CDC34P49427 FAM90A12P-201ENST00000519497 2375 ntBASIC11.81□□□□□ -0.52
CDC34P49427 FAM90A24P-201ENST00000520792 2369 ntBASIC11.81□□□□□ -0.52
CDC34P49427 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CDC34P49427 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CDC34P49427 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.8□□□□□ -0.52
CDC34P49427 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CDC34P49427 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CDC34P49427 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CDC34P49427 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.8□□□□□ -0.52
CDC34P49427 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms