Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CBX5P45973 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.9□□□□□ -0.34
CBX5P45973 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 KRT18P43-201ENST00000469825 1281 ntBASIC12.9□□□□□ -0.34
CBX5P45973 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.9□□□□□ -0.34
CBX5P45973 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.9□□□□□ -0.34
CBX5P45973 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.9□□□□□ -0.34
CBX5P45973 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.9□□□□□ -0.34
CBX5P45973 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.9□□□□□ -0.34
CBX5P45973 MIR6069-201ENST00000620069 79 ntBASIC12.9□□□□□ -0.34
CBX5P45973 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CBX5P45973 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CBX5P45973 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.9□□□□□ -0.34
CBX5P45973 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 AC018665.1-201ENST00000622927 1362 ntBASIC12.9□□□□□ -0.34
CBX5P45973 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CBX5P45973 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.9□□□□□ -0.34
CBX5P45973 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.9□□□□□ -0.34
CBX5P45973 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CBX5P45973 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.9□□□□□ -0.34
CBX5P45973 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.9□□□□□ -0.35
CBX5P45973 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.9□□□□□ -0.35
CBX5P45973 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CBX5P45973 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.9□□□□□ -0.35
CBX5P45973 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CBX5P45973 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.9□□□□□ -0.35
CBX5P45973 AC027020.2-201ENST00000602585 2389 ntBASIC12.89□□□□□ -0.35
CBX5P45973 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CBX5P45973 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CBX5P45973 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 AC011474.4-201ENST00000623523 2076 ntBASIC12.89□□□□□ -0.35
CBX5P45973 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.89□□□□□ -0.35
CBX5P45973 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.89□□□□□ -0.35
CBX5P45973 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.89□□□□□ -0.35
CBX5P45973 AC022447.6-201ENST00000515522 438 ntBASIC12.89□□□□□ -0.35
CBX5P45973 BANF1P1-201ENST00000553684 263 ntBASIC12.89□□□□□ -0.35
CBX5P45973 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.89□□□□□ -0.35
CBX5P45973 AC027601.4-201ENST00000611259 610 ntBASIC12.89□□□□□ -0.35
CBX5P45973 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.89□□□□□ -0.35
CBX5P45973 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.89□□□□□ -0.35
CBX5P45973 AL358933.1-201ENST00000565046 2830 ntBASIC12.89□□□□□ -0.35
CBX5P45973 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 PCDHA5-203ENST00000614258 4248 ntBASIC12.89□□□□□ -0.35
CBX5P45973 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CBX5P45973 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.89□□□□□ -0.35
CBX5P45973 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CBX5P45973 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.89□□□□□ -0.35
CBX5P45973 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CBX5P45973 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.88□□□□□ -0.35
CBX5P45973 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 Z97205.2-201ENST00000564697 1639 ntBASIC12.88□□□□□ -0.35
CBX5P45973 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CBX5P45973 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms