Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HOXC8P31273 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
HOXC8P31273 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 RPL13AP19-201ENST00000434320 584 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 AL354861.1-201ENST00000445213 355 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.88■□□□□ 0.13
HOXC8P31273 NUDT4P2-201ENST00000578341 546 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.88■□□□□ 0.13
HOXC8P31273 AC107464.3-201ENST00000609172 737 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 HLA-C-210ENST00000640219 976 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.88■□□□□ 0.13
HOXC8P31273 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HOXC8P31273 TCAF2P1-201ENST00000291129 2421 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HOXC8P31273 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 AC064801.2-201ENST00000625052 1303 ntBASIC15.88■□□□□ 0.13
HOXC8P31273 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.88■□□□□ 0.13
HOXC8P31273 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.88■□□□□ 0.13
HOXC8P31273 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HOXC8P31273 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 AC090502.4-201ENST00000551714 1386 ntBASIC15.87■□□□□ 0.13
HOXC8P31273 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.87■□□□□ 0.13
HOXC8P31273 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.87■□□□□ 0.13
HOXC8P31273 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HOXC8P31273 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.87■□□□□ 0.13
HOXC8P31273 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HOXC8P31273 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HOXC8P31273 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.87■□□□□ 0.13
HOXC8P31273 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.87■□□□□ 0.13
HOXC8P31273 AC114501.1-201ENST00000445949 172 ntBASIC15.87■□□□□ 0.13
HOXC8P31273 AC018638.5-201ENST00000450885 754 ntBASIC15.87■□□□□ 0.13
HOXC8P31273 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.87■□□□□ 0.13
HOXC8P31273 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.87■□□□□ 0.13
HOXC8P31273 AC007952.4-201ENST00000573866 637 ntBASIC15.87■□□□□ 0.13
HOXC8P31273 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.87■□□□□ 0.13
HOXC8P31273 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HOXC8P31273 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.87■□□□□ 0.13
HOXC8P31273 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 NFIC-211ENST00000641145 8399 ntBASIC15.87■□□□□ 0.13
HOXC8P31273 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.87■□□□□ 0.13
HOXC8P31273 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HOXC8P31273 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 AC215219.1-201ENST00000400706 1817 ntBASIC15.87■□□□□ 0.13
HOXC8P31273 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HOXC8P31273 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HOXC8P31273 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.86■□□□□ 0.13
HOXC8P31273 IL9RP3-201ENST00000442856 1674 ntBASIC15.86■□□□□ 0.13
HOXC8P31273 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.86■□□□□ 0.13
HOXC8P31273 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.86■□□□□ 0.13
HOXC8P31273 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.86■□□□□ 0.13
HOXC8P31273 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HOXC8P31273 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HOXC8P31273 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms