Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.88■□□□□ 0.29
CNGA1P29973 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 AL360270.3-201ENST00000609118 1348 ntBASIC16.88■□□□□ 0.29
CNGA1P29973 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.88■□□□□ 0.29
CNGA1P29973 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CNGA1P29973 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.88■□□□□ 0.29
CNGA1P29973 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CNGA1P29973 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CNGA1P29973 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CNGA1P29973 AC011840.2-201ENST00000563063 1520 ntBASIC16.87■□□□□ 0.29
CNGA1P29973 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CNGA1P29973 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.87■□□□□ 0.29
CNGA1P29973 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.87■□□□□ 0.29
CNGA1P29973 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.87■□□□□ 0.29
CNGA1P29973 HLA-J-204ENST00000495278 958 ntBASIC16.87■□□□□ 0.29
CNGA1P29973 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.87■□□□□ 0.29
CNGA1P29973 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.87■□□□□ 0.29
CNGA1P29973 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.87■□□□□ 0.29
CNGA1P29973 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.87■□□□□ 0.29
CNGA1P29973 AC135983.4-201ENST00000564116 1262 ntBASIC16.87■□□□□ 0.29
CNGA1P29973 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CNGA1P29973 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.87■□□□□ 0.29
CNGA1P29973 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CNGA1P29973 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CNGA1P29973 MBLAC2-202ENST00000514906 1936 ntBASIC16.87■□□□□ 0.29
CNGA1P29973 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.87■□□□□ 0.29
CNGA1P29973 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 AL008718.2-201ENST00000609206 1313 ntBASIC16.87■□□□□ 0.29
CNGA1P29973 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.87■□□□□ 0.29
CNGA1P29973 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CNGA1P29973 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CNGA1P29973 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CNGA1P29973 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.86■□□□□ 0.29
CNGA1P29973 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CNGA1P29973 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.86■□□□□ 0.29
CNGA1P29973 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CNGA1P29973 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.86■□□□□ 0.29
CNGA1P29973 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.86■□□□□ 0.29
CNGA1P29973 AC078991.1-201ENST00000437297 610 ntBASIC16.86■□□□□ 0.29
CNGA1P29973 AC012441.2-201ENST00000444843 739 ntBASIC16.86■□□□□ 0.29
CNGA1P29973 KLF2P1-201ENST00000447438 1042 ntBASIC16.86■□□□□ 0.29
CNGA1P29973 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.86■□□□□ 0.29
CNGA1P29973 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.86■□□□□ 0.29
CNGA1P29973 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.86■□□□□ 0.29
CNGA1P29973 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.86■□□□□ 0.29
CNGA1P29973 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 PGAM1P5-201ENST00000548011 764 ntBASIC16.86■□□□□ 0.29
CNGA1P29973 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.86■□□□□ 0.29
CNGA1P29973 NPM1P43-201ENST00000558669 786 ntBASIC16.86■□□□□ 0.29
CNGA1P29973 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 MIR4754-201ENST00000582477 89 ntBASIC16.86■□□□□ 0.29
CNGA1P29973 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.86■□□□□ 0.29
CNGA1P29973 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CNGA1P29973 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.86■□□□□ 0.29
CNGA1P29973 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.86■□□□□ 0.29
CNGA1P29973 AC007718.1-201ENST00000621078 280 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms