Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SHC1P29353 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 AC079776.1-201ENST00000401540 1152 ntBASIC13.68□□□□□ -0.22
SHC1P29353 AC112492.5-201ENST00000421897 457 ntBASIC13.68□□□□□ -0.22
SHC1P29353 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.68□□□□□ -0.22
SHC1P29353 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 AC244669.2-201ENST00000612320 853 ntBASIC13.68□□□□□ -0.22
SHC1P29353 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 LRRC59-203ENST00000576448 1531 ntBASIC13.68□□□□□ -0.22
SHC1P29353 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SHC1P29353 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.68□□□□□ -0.22
SHC1P29353 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.68□□□□□ -0.22
SHC1P29353 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SHC1P29353 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.68□□□□□ -0.22
SHC1P29353 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SHC1P29353 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SHC1P29353 AC067750.1-201ENST00000608826 6545 ntBASIC13.67□□□□□ -0.22
SHC1P29353 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.67□□□□□ -0.22
SHC1P29353 AL138709.1-201ENST00000614840 1693 ntBASIC13.67□□□□□ -0.22
SHC1P29353 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.67□□□□□ -0.22
SHC1P29353 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SHC1P29353 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.67□□□□□ -0.22
SHC1P29353 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 AC005229.1-201ENST00000392885 409 ntBASIC13.67□□□□□ -0.22
SHC1P29353 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.67□□□□□ -0.22
SHC1P29353 AL355864.2-201ENST00000447420 863 ntBASIC13.67□□□□□ -0.22
SHC1P29353 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.67□□□□□ -0.22
SHC1P29353 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 FTH1P14-201ENST00000482930 551 ntBASIC13.67□□□□□ -0.22
SHC1P29353 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.67□□□□□ -0.22
SHC1P29353 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.67□□□□□ -0.22
SHC1P29353 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.67□□□□□ -0.22
SHC1P29353 AC004466.1-201ENST00000599515 1080 ntBASIC13.67□□□□□ -0.22
SHC1P29353 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.67□□□□□ -0.22
SHC1P29353 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 AC055811.4-201ENST00000624039 1754 ntBASIC13.67□□□□□ -0.22
SHC1P29353 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.67□□□□□ -0.22
SHC1P29353 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
SHC1P29353 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SHC1P29353 AP001267.2-201ENST00000532619 2086 ntBASIC13.67□□□□□ -0.22
SHC1P29353 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.67□□□□□ -0.22
SHC1P29353 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHC1P29353 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms