Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.09□□□□□ -0.15
NCK1P16333 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
NCK1P16333 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.09□□□□□ -0.15
NCK1P16333 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.09□□□□□ -0.15
NCK1P16333 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.09□□□□□ -0.15
NCK1P16333 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.09□□□□□ -0.15
NCK1P16333 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.09□□□□□ -0.15
NCK1P16333 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
NCK1P16333 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NCK1P16333 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.09□□□□□ -0.15
NCK1P16333 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.09□□□□□ -0.15
NCK1P16333 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NCK1P16333 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NCK1P16333 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.09□□□□□ -0.15
NCK1P16333 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
NCK1P16333 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.08□□□□□ -0.15
NCK1P16333 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NCK1P16333 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NCK1P16333 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.08□□□□□ -0.16
NCK1P16333 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.08□□□□□ -0.16
NCK1P16333 HLA-V-204ENST00000476601 1289 ntBASIC14.08□□□□□ -0.16
NCK1P16333 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.08□□□□□ -0.16
NCK1P16333 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
NCK1P16333 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NCK1P16333 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NCK1P16333 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.08□□□□□ -0.16
NCK1P16333 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.08□□□□□ -0.16
NCK1P16333 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.07□□□□□ -0.16
NCK1P16333 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
NCK1P16333 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NCK1P16333 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
NCK1P16333 AC011498.7-201ENST00000624986 2027 ntBASIC14.07□□□□□ -0.16
NCK1P16333 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms