Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC130P13994 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC130P13994 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC130P13994 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC130P13994 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.72■□□□□ 0.11
CCDC130P13994 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC130P13994 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.72■□□□□ 0.11
CCDC130P13994 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC130P13994 MIR4783-201ENST00000580343 82 ntBASIC15.72■□□□□ 0.11
CCDC130P13994 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CCDC130P13994 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC130P13994 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.72■□□□□ 0.11
CCDC130P13994 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC130P13994 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC130P13994 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCDC130P13994 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC130P13994 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC130P13994 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
CCDC130P13994 INTS4P1-203ENST00000641008 3683 ntBASIC15.72■□□□□ 0.11
CCDC130P13994 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
CCDC130P13994 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCDC130P13994 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC130P13994 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC130P13994 MRPL37P1-201ENST00000592451 1337 ntBASIC15.71■□□□□ 0.11
CCDC130P13994 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC130P13994 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC130P13994 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC130P13994 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCDC130P13994 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC130P13994 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 AL591846.1-201ENST00000451736 433 ntBASIC15.71■□□□□ 0.11
CCDC130P13994 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC130P13994 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC130P13994 AC005730.2-201ENST00000564549 1184 ntBASIC15.71■□□□□ 0.11
CCDC130P13994 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC130P13994 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC130P13994 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.71■□□□□ 0.11
CCDC130P13994 BX088702.1-201ENST00000610784 235 ntBASIC15.71■□□□□ 0.11
CCDC130P13994 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC130P13994 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC130P13994 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.71■□□□□ 0.1
CCDC130P13994 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC130P13994 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.71■□□□□ 0.1
CCDC130P13994 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC130P13994 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC130P13994 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CCDC130P13994 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC130P13994 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC130P13994 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC130P13994 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC130P13994 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC130P13994 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC130P13994 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC130P13994 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CCDC130P13994 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC130P13994 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC130P13994 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 AC010141.1-201ENST00000411585 623 ntBASIC15.7■□□□□ 0.1
CCDC130P13994 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC130P13994 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 PUDPP3-201ENST00000445368 636 ntBASIC15.7■□□□□ 0.1
CCDC130P13994 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC130P13994 ALG3P1-201ENST00000508806 1114 ntBASIC15.7■□□□□ 0.1
CCDC130P13994 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC130P13994 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC130P13994 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC130P13994 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC130P13994 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC130P13994 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC130P13994 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms