Protein–RNA interactions for Protein: P13796

LCP1, Plastin-2, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1P13796 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 AC092135.3-201ENST00000624151 1846 ntBASIC15.65■□□□□ 0.1
LCP1P13796 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LCP1P13796 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LCP1P13796 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.65■□□□□ 0.1
LCP1P13796 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LCP1P13796 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.65■□□□□ 0.1
LCP1P13796 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LCP1P13796 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCP1P13796 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 LINC00552-201ENST00000625151 2579 ntBASIC15.64■□□□□ 0.09
LCP1P13796 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 CHMP1AP1-201ENST00000445563 662 ntBASIC15.64■□□□□ 0.09
LCP1P13796 AL355994.2-201ENST00000447882 704 ntBASIC15.64■□□□□ 0.09
LCP1P13796 HIST2H2BB-201ENST00000449108 381 ntBASIC15.64■□□□□ 0.09
LCP1P13796 AL023775.1-201ENST00000454907 1746 ntBASIC15.64■□□□□ 0.09
LCP1P13796 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.64■□□□□ 0.09
LCP1P13796 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.64■□□□□ 0.09
LCP1P13796 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LCP1P13796 RNA5SP412-201ENST00000516234 123 ntBASIC15.64■□□□□ 0.09
LCP1P13796 AL583810.1-201ENST00000553344 1045 ntBASIC15.64■□□□□ 0.09
LCP1P13796 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.64■□□□□ 0.09
LCP1P13796 DUX4L45-201ENST00000566406 1057 ntBASIC15.64■□□□□ 0.09
LCP1P13796 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.64■□□□□ 0.09
LCP1P13796 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.64■□□□□ 0.09
LCP1P13796 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 AL358472.3-201ENST00000608147 415 ntBASIC15.64■□□□□ 0.09
LCP1P13796 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LCP1P13796 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LCP1P13796 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 MRPL37P1-201ENST00000592451 1337 ntBASIC15.64■□□□□ 0.09
LCP1P13796 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LCP1P13796 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCP1P13796 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.63■□□□□ 0.09
LCP1P13796 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.63■□□□□ 0.09
LCP1P13796 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.63■□□□□ 0.09
LCP1P13796 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.63■□□□□ 0.09
LCP1P13796 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.63■□□□□ 0.09
LCP1P13796 AL390755.1-201ENST00000623716 2027 ntBASIC15.63■□□□□ 0.09
LCP1P13796 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LCP1P13796 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
LCP1P13796 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.63■□□□□ 0.09
LCP1P13796 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.63■□□□□ 0.09
LCP1P13796 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.63■□□□□ 0.09
LCP1P13796 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.63■□□□□ 0.09
LCP1P13796 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LCP1P13796 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms