Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.18□□□□□ -0.46
DEFA4P12838 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.18□□□□□ -0.46
DEFA4P12838 AC093512.1-201ENST00000617969 520 ntBASIC12.18□□□□□ -0.46
DEFA4P12838 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
DEFA4P12838 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA4P12838 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA4P12838 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA4P12838 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
DEFA4P12838 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.17□□□□□ -0.46
DEFA4P12838 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
DEFA4P12838 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.17□□□□□ -0.46
DEFA4P12838 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 AC055876.3-201ENST00000431496 288 ntBASIC12.17□□□□□ -0.46
DEFA4P12838 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.17□□□□□ -0.46
DEFA4P12838 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.17□□□□□ -0.46
DEFA4P12838 MEIS3P1-201ENST00000495167 958 ntBASIC12.17□□□□□ -0.46
DEFA4P12838 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.17□□□□□ -0.46
DEFA4P12838 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
DEFA4P12838 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.17□□□□□ -0.46
DEFA4P12838 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 AL844908.2-201ENST00000609461 460 ntBASIC12.17□□□□□ -0.46
DEFA4P12838 AC138649.4-201ENST00000612222 287 ntBASIC12.17□□□□□ -0.46
DEFA4P12838 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 CICP8-201ENST00000455800 2813 ntBASIC12.17□□□□□ -0.46
DEFA4P12838 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
DEFA4P12838 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
DEFA4P12838 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
DEFA4P12838 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
DEFA4P12838 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms