Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.7□□□□□ -0.22
THBS1P07996 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
THBS1P07996 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
THBS1P07996 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
THBS1P07996 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.69□□□□□ -0.22
THBS1P07996 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 AL512384.1-201ENST00000406683 331 ntBASIC13.69□□□□□ -0.22
THBS1P07996 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.69□□□□□ -0.22
THBS1P07996 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 INE1-201ENST00000456273 945 ntBASIC13.69□□□□□ -0.22
THBS1P07996 FTLP10-202ENST00000505798 471 ntBASIC13.69□□□□□ -0.22
THBS1P07996 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC13.69□□□□□ -0.22
THBS1P07996 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 AC068587.3-201ENST00000526613 355 ntBASIC13.69□□□□□ -0.22
THBS1P07996 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 BX088702.1-201ENST00000610784 235 ntBASIC13.69□□□□□ -0.22
THBS1P07996 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 AC138466.3-201ENST00000619983 221 ntBASIC13.69□□□□□ -0.22
THBS1P07996 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC13.69□□□□□ -0.22
THBS1P07996 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.69□□□□□ -0.22
THBS1P07996 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.69□□□□□ -0.22
THBS1P07996 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.69□□□□□ -0.22
THBS1P07996 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
THBS1P07996 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.69□□□□□ -0.22
THBS1P07996 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
THBS1P07996 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 MSTO2P-201ENST00000314835 1709 ntBASIC13.68□□□□□ -0.22
THBS1P07996 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
THBS1P07996 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 AP006294.1-201ENST00000415407 339 ntBASIC13.68□□□□□ -0.22
THBS1P07996 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 GPR53P-205ENST00000457298 1084 ntBASIC13.68□□□□□ -0.22
THBS1P07996 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.68□□□□□ -0.22
THBS1P07996 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
THBS1P07996 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
THBS1P07996 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
THBS1P07996 AP001002.3-201ENST00000623482 206 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms