Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DFFBO76075 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.2□□□□□ -0.46
DFFBO76075 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DFFBO76075 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DFFBO76075 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.2□□□□□ -0.46
DFFBO76075 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
DFFBO76075 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
DFFBO76075 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.2□□□□□ -0.46
DFFBO76075 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DFFBO76075 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
DFFBO76075 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 AL354702.1-201ENST00000442006 1960 ntBASIC12.19□□□□□ -0.46
DFFBO76075 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.19□□□□□ -0.46
DFFBO76075 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.19□□□□□ -0.46
DFFBO76075 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
DFFBO76075 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 RBPMS2P1-201ENST00000437762 623 ntBASIC12.19□□□□□ -0.46
DFFBO76075 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.19□□□□□ -0.46
DFFBO76075 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.19□□□□□ -0.46
DFFBO76075 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.19□□□□□ -0.46
DFFBO76075 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.19□□□□□ -0.46
DFFBO76075 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.19□□□□□ -0.46
DFFBO76075 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.19□□□□□ -0.46
DFFBO76075 SNHG9-202ENST00000564014 471 ntBASIC12.19□□□□□ -0.46
DFFBO76075 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
DFFBO76075 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
DFFBO76075 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
DFFBO76075 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.19□□□□□ -0.46
DFFBO76075 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.19□□□□□ -0.46
DFFBO76075 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
DFFBO76075 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 AGGF1P1-201ENST00000509500 2073 ntBASIC12.18□□□□□ -0.46
DFFBO76075 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
DFFBO76075 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
DFFBO76075 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
DFFBO76075 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
DFFBO76075 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
DFFBO76075 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
DFFBO76075 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms