Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.98□□□□□ -0.17
HCN1O60741 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.98□□□□□ -0.17
HCN1O60741 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
HCN1O60741 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.98□□□□□ -0.17
HCN1O60741 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.98□□□□□ -0.17
HCN1O60741 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 AC025181.2-201ENST00000606994 802 ntBASIC13.98□□□□□ -0.17
HCN1O60741 AP005019.2-201ENST00000615104 511 ntBASIC13.98□□□□□ -0.17
HCN1O60741 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HCN1O60741 MIR6775-201ENST00000617557 69 ntBASIC13.98□□□□□ -0.17
HCN1O60741 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 AC140479.7-201ENST00000636301 2332 ntBASIC13.98□□□□□ -0.17
HCN1O60741 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.98□□□□□ -0.17
HCN1O60741 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.98□□□□□ -0.17
HCN1O60741 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HCN1O60741 AL138799.1-201ENST00000448213 1675 ntBASIC13.98□□□□□ -0.17
HCN1O60741 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HCN1O60741 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 PDIA3P1-201ENST00000471856 1510 ntBASIC13.97□□□□□ -0.17
HCN1O60741 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 AC092933.1-201ENST00000393644 945 ntBASIC13.97□□□□□ -0.17
HCN1O60741 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.97□□□□□ -0.17
HCN1O60741 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 KRT18P25-201ENST00000508931 1278 ntBASIC13.97□□□□□ -0.17
HCN1O60741 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.97□□□□□ -0.17
HCN1O60741 AP001582.1-201ENST00000525856 295 ntBASIC13.97□□□□□ -0.17
HCN1O60741 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.97□□□□□ -0.17
HCN1O60741 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.97□□□□□ -0.17
HCN1O60741 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.97□□□□□ -0.17
HCN1O60741 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.97□□□□□ -0.17
HCN1O60741 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HCN1O60741 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HCN1O60741 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.96□□□□□ -0.17
HCN1O60741 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.96□□□□□ -0.17
HCN1O60741 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.96□□□□□ -0.17
HCN1O60741 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.96□□□□□ -0.17
HCN1O60741 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HCN1O60741 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HCN1O60741 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.96□□□□□ -0.17
HCN1O60741 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms