Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAF3IP2O43734 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 PDIA3P1-201ENST00000471856 1510 ntBASIC13.24□□□□□ -0.29
TRAF3IP2O43734 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AC006001.1-201ENST00000325130 474 ntBASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 U91328.1-201ENST00000437528 223 ntBASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 ALG3P1-201ENST00000508806 1114 ntBASIC13.24□□□□□ -0.29
TRAF3IP2O43734 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AP000812.2-201ENST00000538934 718 ntBASIC13.24□□□□□ -0.29
TRAF3IP2O43734 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AP001002.3-201ENST00000623482 206 ntBASIC13.24□□□□□ -0.29
TRAF3IP2O43734 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AC015656.1-201ENST00000624209 3578 ntBASIC13.24□□□□□ -0.29
TRAF3IP2O43734 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAF3IP2O43734 AL354989.2-201ENST00000435838 1540 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AC005089.1-201ENST00000619486 2241 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AC079776.1-201ENST00000401540 1152 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AC004945.1-201ENST00000416738 983 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 RPL7P3-201ENST00000441388 714 ntBASIC13.23□□□□□ -0.29
TRAF3IP2O43734 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAF3IP2O43734 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms