Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF423-201ENST00000262383 4578 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 FAM90A12P-201ENST00000519497 2375 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 FAM90A24P-201ENST00000520792 2369 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 DPCR1-203ENST00000636043 5587 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AC126564.1-201ENST00000623628 2013 ntBASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 BEND3-202ENST00000429433 6654 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 DCLRE1C-210ENST00000378289 3532 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ME3-201ENST00000323418 1068 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 FAM197Y1-201ENST00000421178 764 ntBASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SIGLEC30P-201ENST00000455569 941 ntBASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 RPS20-210ENST00000523936 899 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AL023803.3-201ENST00000615559 522 ntBASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AL353593.1-201ENST00000602517 3955 ntBASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AMBRA1-202ENST00000458649 5351 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AL353692.3-201ENST00000407031 1396 ntBASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CHKB-CPT1BH3BT56 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms