RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.45
BEND3-202ENST00000429433 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
BEND3-202ENST00000429433 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
BEND3-202ENST00000429433 PELP1Q8IZL8 1130 aaKnown RBP17.07■□□□□ 0.32
BEND3-202ENST00000429433 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
BEND3-202ENST00000429433 TTBK1Q5TCY1 1321 aaPredicted RBP16.64■□□□□ 0.25
BEND3-202ENST00000429433 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
BEND3-202ENST00000429433 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
BEND3-202ENST00000429433 NISCHQ9Y2I1 1504 aa16.42■□□□□ 0.22
BEND3-202ENST00000429433 MYT1Q01538 1121 aa16.41■□□□□ 0.22
BEND3-202ENST00000429433 APLP2Q06481 763 aa16.27■□□□□ 0.2
BEND3-202ENST00000429433 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
BEND3-202ENST00000429433 CCER1Q8TC90 406 aaPredicted RBP16.26■□□□□ 0.19
BEND3-202ENST00000429433 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.19
BEND3-202ENST00000429433 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
BEND3-202ENST00000429433 RANGAP1P46060 587 aaPredicted RBP16.16■□□□□ 0.18
BEND3-202ENST00000429433 PPARGC1BQ86YN6 1023 aaKnown RBP16.11■□□□□ 0.17
BEND3-202ENST00000429433 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
BEND3-202ENST00000429433 NEFLP07196 543 aa15.84■□□□□ 0.13
BEND3-202ENST00000429433 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
BEND3-202ENST00000429433 LOC105371045A0A1W2PR82 267 aa15.63■□□□□ 0.09
BEND3-202ENST00000429433 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
BEND3-202ENST00000429433 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
BEND3-202ENST00000429433 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
BEND3-202ENST00000429433 HRCP23327 699 aa15.45■□□□□ 0.06
BEND3-202ENST00000429433 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
BEND3-202ENST00000429433 DAXXQ9UER7 740 aaPredicted RBP15.41■□□□□ 0.06
BEND3-202ENST00000429433 ITGAEP38570 1179 aa15.38■□□□□ 0.05
BEND3-202ENST00000429433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
BEND3-202ENST00000429433 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
BEND3-202ENST00000429433 POLR3GLQ9BT43 218 aa15.24■□□□□ 0.03
BEND3-202ENST00000429433 RTL5Q5HYW3 569 aaPredicted RBP15.18■□□□□ 0.02
BEND3-202ENST00000429433 BCANQ96GW7 911 aa15.14■□□□□ 0.01
BEND3-202ENST00000429433 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
BEND3-202ENST00000429433 GTF3C3Q9Y5Q9 886 aa15.05■□□□□ -0
BEND3-202ENST00000429433 DIEXFQ68CQ4 756 aaKnown RBP15.03■□□□□ -0
BEND3-202ENST00000429433 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
BEND3-202ENST00000429433 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
BEND3-202ENST00000429433 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
BEND3-202ENST00000429433 CDK11AQ9UQ88 783 aaPredicted RBP14.79□□□□□ -0.04
BEND3-202ENST00000429433 BCL11AQ9H165 835 aa14.73□□□□□ -0.05
BEND3-202ENST00000429433 MYT1LQ9UL68 1186 aa14.72□□□□□ -0.05
BEND3-202ENST00000429433 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
BEND3-202ENST00000429433 ANP32CO43423 234 aa14.67□□□□□ -0.06
BEND3-202ENST00000429433 FAM50AQ14320 339 aaKnown RBP14.67□□□□□ -0.06
BEND3-202ENST00000429433 ACIN1Q9UKV3 1341 aaKnown RBP14.61□□□□□ -0.07
BEND3-202ENST00000429433 ZBTB47Q9UFB7 747 aaPredicted RBP14.6□□□□□ -0.07
BEND3-202ENST00000429433 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
BEND3-202ENST00000429433 ZNF326Q5BKZ1 582 aaKnown RBP14.59□□□□□ -0.07
BEND3-202ENST00000429433 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
BEND3-202ENST00000429433 ARID3CA6NKF2 412 aa14.54□□□□□ -0.08
BEND3-202ENST00000429433 TRIM52Q96A61 297 aa14.52□□□□□ -0.09
BEND3-202ENST00000429433 GLIPR1L2Q4G1C9 344 aa14.51□□□□□ -0.09
BEND3-202ENST00000429433 NPM2Q86SE8 214 aaKnown RBP14.49□□□□□ -0.09
BEND3-202ENST00000429433 SENP3-EIF4A1A0A087X0R7 540 aa14.48□□□□□ -0.09
BEND3-202ENST00000429433 P3H3Q8IVL6 736 aa14.46□□□□□ -0.1
BEND3-202ENST00000429433 ANP32BQ92688 251 aaKnown RBP14.45□□□□□ -0.1
BEND3-202ENST00000429433 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
BEND3-202ENST00000429433 FKBP8Q14318 412 aa14.43□□□□□ -0.1
BEND3-202ENST00000429433 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
BEND3-202ENST00000429433 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
BEND3-202ENST00000429433 CANXP27824 592 aaKnown RBP14.41□□□□□ -0.1
BEND3-202ENST00000429433 SALL2Q9Y467 1007 aaPredicted RBP14.39□□□□□ -0.11
BEND3-202ENST00000429433 EIF5BO60841 1220 aaKnown RBP14.38□□□□□ -0.11
BEND3-202ENST00000429433 NBR1Q14596 966 aa14.38□□□□□ -0.11
BEND3-202ENST00000429433 NEFMP07197 916 aa14.36□□□□□ -0.11
BEND3-202ENST00000429433 ARXQ96QS3 562 aa14.34□□□□□ -0.11
BEND3-202ENST00000429433 UPF2Q9HAU5 1272 aaKnown RBP14.3□□□□□ -0.12
BEND3-202ENST00000429433 DDX10Q13206 875 aaKnown RBP14.3□□□□□ -0.12
BEND3-202ENST00000429433 MIER1Q8N108 512 aa14.28□□□□□ -0.12
BEND3-202ENST00000429433 FAM9BQ8IZU0 186 aa14.24□□□□□ -0.13
BEND3-202ENST00000429433 SLC24A1O60721 1099 aa14.24□□□□□ -0.13
BEND3-202ENST00000429433 HSP90AA1P07900 732 aaKnown RBP14.22□□□□□ -0.13
BEND3-202ENST00000429433 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
BEND3-202ENST00000429433 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
BEND3-202ENST00000429433 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
BEND3-202ENST00000429433 FBLN2P98095 1184 aa14.16□□□□□ -0.14
BEND3-202ENST00000429433 DCAF1Q9Y4B6 1507 aa14.16□□□□□ -0.14
BEND3-202ENST00000429433 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.15□□□□□ -0.14
BEND3-202ENST00000429433 CSRNP3Q8WYN3 585 aa14.13□□□□□ -0.15
BEND3-202ENST00000429433 TONSLQ96HA7 1378 aa14.13□□□□□ -0.15
BEND3-202ENST00000429433 ANP32EQ9BTT0 268 aa14.13□□□□□ -0.15
BEND3-202ENST00000429433 CCDC136Q96JN2 1154 aa14.12□□□□□ -0.15
BEND3-202ENST00000429433 ZNF777Q9ULD5 760 aaPredicted RBP14.11□□□□□ -0.15
BEND3-202ENST00000429433 ABCC9O60706 1549 aa14.1□□□□□ -0.15
BEND3-202ENST00000429433 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
BEND3-202ENST00000429433 CHIC2Q9UKJ5 165 aa14.05□□□□□ -0.16
BEND3-202ENST00000429433 DDRGK1Q96HY6 314 aa14.05□□□□□ -0.16
BEND3-202ENST00000429433 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
BEND3-202ENST00000429433 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
BEND3-202ENST00000429433 BECN1Q14457 450 aa13.99□□□□□ -0.17
BEND3-202ENST00000429433 TNNT2P45379 298 aaPredicted RBP13.98□□□□□ -0.17
BEND3-202ENST00000429433 TRIM44Q96DX7 344 aaPredicted RBP13.95□□□□□ -0.18
BEND3-202ENST00000429433 KDM2AQ9Y2K7 1162 aa13.94□□□□□ -0.18
BEND3-202ENST00000429433 ERICH6BQ5W0A0 696 aa13.94□□□□□ -0.18
BEND3-202ENST00000429433 PPM1GO15355 546 aaPredicted RBP13.93□□□□□ -0.18
BEND3-202ENST00000429433 GOLGA6L22H0YM25 854 aa13.93□□□□□ -0.18
BEND3-202ENST00000429433 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
BEND3-202ENST00000429433 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
BEND3-202ENST00000429433 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms