Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 RPL18P13-201ENST00000478088 569 ntBASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 SNORD3B-2-202ENST00000571722 791 ntBASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 AC009884.2-201ENST00000603110 324 ntBASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 AL157791.1-201ENST00000553667 1699 ntBASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1G3Q9Y6M4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 AC003102.2-201ENST00000589195 1469 ntBASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 RN7SKP214-201ENST00000364208 315 ntBASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 HLA-J-204ENST00000495278 958 ntBASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CSNK1G3Q9Y6M4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms