Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPBQ9Y5S2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 GAS7-216ENST00000583882 553 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 PIFO-201ENST00000369737 746 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 MIR1301-201ENST00000408518 82 ntBASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 AL929302.1-201ENST00000426556 871 ntBASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 AC083801.1-201ENST00000491689 358 ntBASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 SLC25A15P3-201ENST00000505530 290 ntBASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC21.66■■□□□ 1.06
CDC42BPBQ9Y5S2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 AC215219.1-201ENST00000400706 1817 ntBASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 AL512599.1-201ENST00000430724 685 ntBASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 DLK1-205ENST00000556051 469 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDC42BPBQ9Y5S2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 AJ011931.1-201ENST00000618749 2492 ntBASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 AC006486.2-201ENST00000624246 2199 ntBASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 AC022080.1-201ENST00000366255 781 ntBASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 AC006548.2-201ENST00000605217 529 ntBASIC21.64■■□□□ 1.06
CDC42BPBQ9Y5S2 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC21.64■■□□□ 1.05
CDC42BPBQ9Y5S2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
CDC42BPBQ9Y5S2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPBQ9Y5S2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPBQ9Y5S2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.64■■□□□ 1.05
CDC42BPBQ9Y5S2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC21.64■■□□□ 1.05
CDC42BPBQ9Y5S2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDC42BPBQ9Y5S2 AC092573.1-201ENST00000433054 884 ntBASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDC42BPBQ9Y5S2 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms