Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 NCLP1-201ENST00000445357 1963 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 HMGA1P7-201ENST00000406908 502 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 AC096734.2-201ENST00000562054 433 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 MIR3687-2-201ENST00000577708 61 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 MTDHP5-201ENST00000598980 586 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 MIR3687-1-201ENST00000614492 61 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 AC107375.1-201ENST00000564464 2231 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 AGAP10P-201ENST00000454844 2418 ntBASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
LRCH1Q9Y2L9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 MKRN5P-201ENST00000445263 1467 ntBASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 AC024075.2-201ENST00000598112 1473 ntBASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 KRT8P37-201ENST00000451609 1420 ntBASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 MIR1233-2-201ENST00000408138 82 ntBASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 MIR1233-1-201ENST00000408722 82 ntBASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 AC006538.3-201ENST00000612495 578 ntBASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 AC007064.4-201ENST00000637740 555 ntBASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LRCH1Q9Y2L9 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LRCH1Q9Y2L9 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms