Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 IL6-201ENST00000258743 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 SNORA48.9-201ENST00000516419 162 ntBASIC14.31□□□□□ -0.12
LHX6Q9UPM6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC090857.1-201ENST00000527400 390 ntBASIC14.31□□□□□ -0.12
LHX6Q9UPM6 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC135279.1-201ENST00000543493 504 ntBASIC14.31□□□□□ -0.12
LHX6Q9UPM6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC022748.3-201ENST00000621828 275 ntBASIC14.31□□□□□ -0.12
LHX6Q9UPM6 AC090373.1-201ENST00000623955 603 ntBASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CU459211.1-201ENST00000635667 749 ntBASIC14.31□□□□□ -0.12
LHX6Q9UPM6 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 LINC01965-201ENST00000412112 1378 ntTSL 3 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 TBC1D3J-201ENST00000620719 1426 ntBASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LHX6Q9UPM6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 OR6K3-202ENST00000368146 996 ntBASIC14.3□□□□□ -0.12
LHX6Q9UPM6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AP000356.3-201ENST00000382243 753 ntBASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 KRT18P43-201ENST00000469825 1281 ntBASIC14.3□□□□□ -0.12
LHX6Q9UPM6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC008840.1-201ENST00000512486 809 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 MTND1P36-201ENST00000522384 936 ntBASIC14.3□□□□□ -0.12
LHX6Q9UPM6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 RN7SL163P-201ENST00000583100 276 ntBASIC14.3□□□□□ -0.12
LHX6Q9UPM6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC242376.2-201ENST00000619355 883 ntBASIC14.3□□□□□ -0.12
LHX6Q9UPM6 MME-218ENST00000625667 363 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC068137.4-201ENST00000638485 296 ntBASIC14.3□□□□□ -0.12
LHX6Q9UPM6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.3□□□□□ -0.12
LHX6Q9UPM6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms