Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 FAM86GP-201ENST00000448322 971 ntBASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 HLA-J-203ENST00000494367 1087 ntBASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 AC079781.4-201ENST00000641908 219 ntBASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
GTF2A1LQ9UNN4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 KRT18P13-201ENST00000400056 1290 ntBASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 TREML5P-201ENST00000421694 576 ntBASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GTF2A1LQ9UNN4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms