Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHA4Q9UN74 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 KRT8P28-201ENST00000433288 1390 ntBASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHA4Q9UN74 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 E2F3P2-201ENST00000447755 1422 ntBASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AL035414.1-201ENST00000451327 857 ntBASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 DUX4L46-201ENST00000566845 751 ntBASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 MIR4783-201ENST00000580343 82 ntBASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AC015818.8-201ENST00000587907 1519 ntBASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHA4Q9UN74 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.3
PCDHA4Q9UN74 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA4Q9UN74 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA4Q9UN74 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHA4Q9UN74 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHA4Q9UN74 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms