Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.21□□□□□ -0.29
DUX4Q9UBX2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
DUX4Q9UBX2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DUX4Q9UBX2 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.21□□□□□ -0.3
DUX4Q9UBX2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DUX4Q9UBX2 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DUX4Q9UBX2 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
DUX4Q9UBX2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DUX4Q9UBX2 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 INTS4P1-203ENST00000641008 3683 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC126365.1-201ENST00000578585 1514 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 FAM8A3P-201ENST00000427218 844 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC104794.3-201ENST00000566840 1248 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC011467.4-201ENST00000594891 528 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC004461.2-201ENST00000629517 803 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AF228730.6-201ENST00000641497 218 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC084121.3-201ENST00000641716 218 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC092135.3-201ENST00000624151 1846 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC112693.3-201ENST00000624819 1983 ntBASIC13.2□□□□□ -0.3
DUX4Q9UBX2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.2□□□□□ -0.3
DUX4Q9UBX2 AC090616.6-203ENST00000579186 1945 ntBASIC13.19□□□□□ -0.3
DUX4Q9UBX2 BX640514.1-201ENST00000583223 1918 ntBASIC13.19□□□□□ -0.3
DUX4Q9UBX2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms