Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD248Q9HCU0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.76■□□□□ 0.11
CD248Q9HCU0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC090616.6-203ENST00000579186 1945 ntBASIC15.75■□□□□ 0.11
CD248Q9HCU0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC026954.1-201ENST00000429771 1293 ntBASIC15.75■□□□□ 0.11
CD248Q9HCU0 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 MIR4313-201ENST00000580760 101 ntBASIC15.75■□□□□ 0.11
CD248Q9HCU0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC093813.1-201ENST00000605066 256 ntBASIC15.75■□□□□ 0.11
CD248Q9HCU0 AC107373.2-201ENST00000607735 490 ntBASIC15.75■□□□□ 0.11
CD248Q9HCU0 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD248Q9HCU0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CD248Q9HCU0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 HSPA7-201ENST00000445535 1927 ntBASIC15.74■□□□□ 0.11
CD248Q9HCU0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 AC016694.1-201ENST00000434179 700 ntBASIC15.74■□□□□ 0.11
CD248Q9HCU0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 AL606495.2-201ENST00000605867 535 ntBASIC15.74■□□□□ 0.11
CD248Q9HCU0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CD248Q9HCU0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD248Q9HCU0 PPT1-213ENST00000641319 2388 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms