Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.08□□□□□ -0.31
ELL3Q9HB65 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.08□□□□□ -0.31
ELL3Q9HB65 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ELL3Q9HB65 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.08□□□□□ -0.31
ELL3Q9HB65 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
ELL3Q9HB65 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AC097359.2-201ENST00000604992 2389 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AC018442.1-201ENST00000421439 2061 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 TOMM22P5-201ENST00000416399 439 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 HMGN1P19-201ENST00000436976 333 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 BCRP1-201ENST00000444246 691 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 RNA5SP421-201ENST00000516864 134 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 SAMD11P1-201ENST00000571429 661 ntBASIC13.08□□□□□ -0.32
ELL3Q9HB65 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ELL3Q9HB65 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.08□□□□□ -0.32
ELL3Q9HB65 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 LILRP1-201ENST00000444199 1370 ntBASIC13.07□□□□□ -0.32
ELL3Q9HB65 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 AC004066.1-201ENST00000502488 802 ntBASIC13.07□□□□□ -0.32
ELL3Q9HB65 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ELL3Q9HB65 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.07□□□□□ -0.32
ELL3Q9HB65 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms