Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.33■□□□□ 0.52
UPF2Q9HAU5 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 DNAJB3-201ENST00000446806 729 ntBASIC18.32■□□□□ 0.52
UPF2Q9HAU5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 TIMM17BP1-201ENST00000545713 516 ntBASIC18.32■□□□□ 0.52
UPF2Q9HAU5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 MIR4469-201ENST00000583919 79 ntBASIC18.32■□□□□ 0.52
UPF2Q9HAU5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
UPF2Q9HAU5 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 AC130686.1-201ENST00000622936 2466 ntBASIC18.31■□□□□ 0.52
UPF2Q9HAU5 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 AL645937.2-201ENST00000396808 931 ntBASIC18.31■□□□□ 0.52
UPF2Q9HAU5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UPF2Q9HAU5 AL158070.2-201ENST00000623713 1621 ntBASIC18.31■□□□□ 0.52
UPF2Q9HAU5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UPF2Q9HAU5 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms