Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 AL133551.1-201ENST00000610279 1222 ntBASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 SNX20-205ENST00000610485 557 ntTSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 MIR6871-201ENST00000613433 56 ntBASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ALOX12P2-203ENST00000570921 1945 ntBASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
COL25A1Q9BXS0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AC060834.1-201ENST00000443027 2032 ntBASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 KLK8-203ENST00000347619 555 ntTSL 2 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 KRT18P33-201ENST00000398525 1043 ntBASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 TLE1P1-201ENST00000422965 589 ntBASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AC008021.1-201ENST00000474180 414 ntBASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 GCOM2-201ENST00000509133 1104 ntBASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AC147067.2-201ENST00000608161 289 ntBASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 AL031590.1-202ENST00000641466 1737 ntBASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
COL25A1Q9BXS0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 POLR3DP1-201ENST00000398689 1176 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 PPP1R2P4-201ENST00000424051 595 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 GAPDHP65-201ENST00000425487 1006 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 TBC1D3P6-201ENST00000505954 962 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AC023051.2-201ENST00000541141 460 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 NEMF-210ENST00000556672 590 ntTSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AC090616.6-202ENST00000583601 1088 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AL031768.1-201ENST00000606542 701 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 AC139100.2-201ENST00000616901 662 ntBASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
COL25A1Q9BXS0 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms