Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 CICP23-201ENST00000605013 2741 ntBASIC17.26■□□□□ 0.35
SLF1Q9BQI6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 MIR769-201ENST00000390225 118 ntBASIC17.26■□□□□ 0.35
SLF1Q9BQI6 AC104073.2-201ENST00000453737 312 ntBASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 AC005324.6-201ENST00000587972 613 ntBASIC17.26■□□□□ 0.35
SLF1Q9BQI6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 AC008825.2-201ENST00000603374 718 ntBASIC17.26■□□□□ 0.35
SLF1Q9BQI6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.26■□□□□ 0.35
SLF1Q9BQI6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.25■□□□□ 0.35
SLF1Q9BQI6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 AL008707.1-201ENST00000422498 534 ntBASIC17.25■□□□□ 0.35
SLF1Q9BQI6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 AC132192.2-201ENST00000596206 1147 ntBASIC17.25■□□□□ 0.35
SLF1Q9BQI6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.25■□□□□ 0.35
SLF1Q9BQI6 AC068587.8-201ENST00000641239 219 ntBASIC17.25■□□□□ 0.35
SLF1Q9BQI6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.25■□□□□ 0.35
SLF1Q9BQI6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 AC011742.3-201ENST00000439053 820 ntBASIC17.24■□□□□ 0.35
SLF1Q9BQI6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms