Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VRK1Q99986 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
VRK1Q99986 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VRK1Q99986 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 AC009090.5-201ENST00000624886 2285 ntBASIC13.25□□□□□ -0.29
VRK1Q99986 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.25□□□□□ -0.29
VRK1Q99986 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.25□□□□□ -0.29
VRK1Q99986 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 KRT8P44-201ENST00000441609 1350 ntBASIC13.25□□□□□ -0.29
VRK1Q99986 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
VRK1Q99986 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.25□□□□□ -0.29
VRK1Q99986 AC104989.1-201ENST00000519711 778 ntBASIC13.25□□□□□ -0.29
VRK1Q99986 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.25□□□□□ -0.29
VRK1Q99986 AC068587.3-201ENST00000526613 355 ntBASIC13.25□□□□□ -0.29
VRK1Q99986 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.25□□□□□ -0.29
VRK1Q99986 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.25□□□□□ -0.29
VRK1Q99986 AC009486.1-201ENST00000569860 813 ntBASIC13.25□□□□□ -0.29
VRK1Q99986 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
VRK1Q99986 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
VRK1Q99986 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
VRK1Q99986 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VRK1Q99986 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
VRK1Q99986 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VRK1Q99986 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VRK1Q99986 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VRK1Q99986 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.24□□□□□ -0.29
VRK1Q99986 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
VRK1Q99986 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.24□□□□□ -0.29
VRK1Q99986 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms