Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 KRT17P5-201ENST00000332088 839 ntBASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 LDHBP1-201ENST00000455730 1119 ntBASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 MIR6769A-201ENST00000617340 73 ntBASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 AC097359.2-201ENST00000604992 2389 ntBASIC17.07■□□□□ 0.32
CDK5RAP2Q96SN8 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 LINC01783-202ENST00000614408 828 ntBASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 BX284668.2-205ENST00000619677 828 ntBASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 LINC01815-202ENST00000641468 1409 ntBASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 AC113367.3-201ENST00000508316 1912 ntBASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP2Q96SN8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AL627389.1-201ENST00000413508 1182 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC104784.1-201ENST00000473096 294 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 MIR2392-201ENST00000584881 84 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 SIGLEC18P-201ENST00000602271 909 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 U62317.3-201ENST00000608319 855 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 COX6A1P2-201ENST00000620597 330 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC011491.1-203ENST00000637688 543 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.05■□□□□ 0.32
CDK5RAP2Q96SN8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms