Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CICP16-201ENST00000502609 2813 ntBASIC15.11■□□□□ 0.01
RTP4Q96DX8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RTP4Q96DX8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.1■□□□□ 0.01
RTP4Q96DX8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 AC025279.2-201ENST00000569730 653 ntBASIC15.1■□□□□ 0.01
RTP4Q96DX8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
RTP4Q96DX8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RTP4Q96DX8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 AC005229.1-201ENST00000392885 409 ntBASIC15.09■□□□□ 0.01
RTP4Q96DX8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 AP003171.2-201ENST00000528208 925 ntBASIC15.09■□□□□ 0.01
RTP4Q96DX8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 MIR6799-201ENST00000620297 69 ntBASIC15.09■□□□□ 0.01
RTP4Q96DX8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTP4Q96DX8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.09■□□□□ 0.01
RTP4Q96DX8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms