Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 AC104596.2-201ENST00000512793 793 ntBASIC16.82■□□□□ 0.28
SMARCE1Q969G3 AC022616.1-201ENST00000518688 554 ntBASIC16.82■□□□□ 0.28
SMARCE1Q969G3 AP001582.1-201ENST00000525856 295 ntBASIC16.82■□□□□ 0.28
SMARCE1Q969G3 MIR8072-201ENST00000614241 80 ntBASIC16.82■□□□□ 0.28
SMARCE1Q969G3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMARCE1Q969G3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 RNU1-114P-201ENST00000365297 166 ntBASIC16.81■□□□□ 0.28
SMARCE1Q969G3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.81■□□□□ 0.28
SMARCE1Q969G3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 AC026434.2-201ENST00000506094 1078 ntBASIC16.8■□□□□ 0.28
SMARCE1Q969G3 AC093004.1-201ENST00000508850 424 ntBASIC16.8■□□□□ 0.28
SMARCE1Q969G3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 AC055876.2-201ENST00000531834 546 ntBASIC16.8■□□□□ 0.28
SMARCE1Q969G3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMARCE1Q969G3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms