Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 MIR1233-2-201ENST00000408138 82 ntBASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 MIR1233-1-201ENST00000408722 82 ntBASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC114501.2-201ENST00000439631 535 ntBASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC044860.1-202ENST00000559481 777 ntBASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AL844908.2-201ENST00000609461 460 ntBASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 AC023090.2-201ENST00000625182 2110 ntBASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.17□□□□□ -0.3
DNAAF1Q8NEP3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 AL360270.3-201ENST00000609118 1348 ntBASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 FAM86GP-201ENST00000448322 971 ntBASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
DNAAF1Q8NEP3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms