Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 AC007191.1-201ENST00000623179 2995 ntBASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 RPS2P32-201ENST00000439199 892 ntBASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 RPL13AP20-201ENST00000459725 609 ntBASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 DUX4L46-201ENST00000566845 751 ntBASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 AC023908.3-201ENST00000564211 3047 ntBASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 E2F3P2-201ENST00000447755 1422 ntBASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.1□□□□□ -0.31
ZIC4Q8N9L1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AC015818.8-201ENST00000587907 1519 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MIR326-201ENST00000362220 95 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AC079178.1-201ENST00000420915 656 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 GOLGA2P4-201ENST00000441462 777 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 RPSAP36-202ENST00000494591 1261 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 RN7SL560P-201ENST00000577943 264 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AC009955.4-201ENST00000597192 544 ntBASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC4Q8N9L1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms