Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC83Q8IWF9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 AC010327.5-201ENST00000586923 3061 ntBASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 KRT18P25-201ENST00000508931 1278 ntBASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 AC092364.2-202ENST00000597012 1073 ntBASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 CICP16-201ENST00000502609 2813 ntBASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC83Q8IWF9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AL138725.1-201ENST00000407347 1314 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 RN7SKP230-201ENST00000365642 335 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 ACKR1-201ENST00000368121 1240 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 TLE1P1-201ENST00000422965 589 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AL162726.2-201ENST00000438986 1017 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AC022137.2-201ENST00000503482 481 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 MYADML-201ENST00000474610 2147 ntBASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC83Q8IWF9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC83Q8IWF9 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms