Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FAM207CP-201ENST00000443486 507 ntBASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 TPT1P11-201ENST00000458482 498 ntBASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 WFDC1-204ENST00000613603 549 ntBASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CU634019.7-201ENST00000624153 1185 ntBASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 FP236241.2-201ENST00000624906 1185 ntBASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00346Q8IVM7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 SPCS2P1-201ENST00000561636 679 ntBASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 CLUHP6-201ENST00000580789 941 ntBASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 AC004466.1-201ENST00000599515 1080 ntBASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 AP005019.2-201ENST00000615104 511 ntBASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 SALL4P5-201ENST00000419001 1760 ntBASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00346Q8IVM7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 HSPA7-201ENST00000445535 1927 ntBASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00346Q8IVM7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LINC00346Q8IVM7 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms